Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl aminopeptidase serine peptidase. merops family s33 | SAMN05421512_106269 | Not Available | Negative | 2654914 - 2655879 | 36010.6 |
| cation/acetate symporter | SAMN05421512_106270 | Not Available | Negative | 2656019 - 2657842 | 63613.8 |
| putative solute:sodium symporter small subunit | SAMN05421512_106271 | Not Available | Negative | 2657839 - 2658141 | 11012.6 |
| two component transcriptional regulator, luxr family | SAMN05421512_106272 | Not Available | Positive | 2658463 - 2659131 | 23923.9 |
| hypothetical protein | SAMN05421512_106273 | Not Available | Negative | 2659133 - 2659762 | 22371.3 |
| na+/proline symporter | SAMN05421512_106274 | Not Available | Negative | 2659898 - 2663428 | 127776.0 |
| large conductance mechanosensitive channel | SAMN05421512_106275 | Not Available | Positive | 2663635 - 2664063 | 15157.9 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05421512_106276 | Not Available | Positive | 2664156 - 2665325 | 42448.5 |
| pas/pac sensor signal transduction histidine kinase | SAMN05421512_106277 | Not Available | Positive | 2665434 - 2666609 | 42440.1 |
| two component transcriptional regulator, luxr family | SAMN05421512_106278 | Not Available | Positive | 2666615 - 2667232 | 22495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
