Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoesterase | SAMN05421512_106259 | Not Available | Negative | 2644496 - 2645221 | 26443.6 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN05421512_106260 | Not Available | Negative | 2645218 - 2647737 | 92395.4 |
| putative mrna 3-end processing factor | SAMN05421512_106261 | Not Available | Positive | 2647825 - 2648919 | 38875.1 |
| protein of unknown function | SAMN05421512_106262 | Not Available | Positive | 2648916 - 2649338 | 15750.9 |
| dna ligase-1 | SAMN05421512_106263 | Not Available | Positive | 2649357 - 2651009 | 61484.3 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05421512_106264 | Not Available | Positive | 2651101 - 2651721 | 22790.2 |
| hypothetical protein | SAMN05421512_106265 | Not Available | Positive | 2651800 - 2652285 | 17898.4 |
| acyl-coa thioester hydrolase | SAMN05421512_106266 | Not Available | Negative | 2652322 - 2653194 | 32016.3 |
| acetyl esterase/lipase | SAMN05421512_106267 | Not Available | Negative | 2653250 - 2654218 | 34530.8 |
| secondary thiamine-phosphate synthase enzyme | SAMN05421512_106268 | Not Available | Positive | 2654431 - 2654910 | 18011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
