Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain enoyl-coa hydratase /3-hydroxyacyl-coa dehydrogenase | SAMN05421512_106249 | Not Available | Negative | 2629056 - 2631275 | 80329.8 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05421512_106250 | Not Available | Positive | 2631417 - 2632178 | 27570.4 |
| acetyl-coa c-acetyltransferase | SAMN05421512_106251 | Not Available | Negative | 2632208 - 2633416 | 42090.5 |
| acyl-coa dehydrogenase | SAMN05421512_106252 | Not Available | Negative | 2633482 - 2634606 | 41102.1 |
| acyl-coa dehydrogenase | SAMN05421512_106253 | Not Available | Negative | 2634731 - 2636527 | 64197.7 |
| transcriptional regulator | SAMN05421512_106254 | Not Available | Negative | 2636875 - 2637324 | 17052.7 |
| localization factor podjl | SAMN05421512_106255 | Not Available | Positive | 2637673 - 2641983 | 153931.0 |
| hypothetical protein | SAMN05421512_106256 | Not Available | Positive | 2642218 - 2643153 | 33124.3 |
| conserved hypothetical protein | SAMN05421512_106257 | Not Available | Positive | 2643150 - 2643938 | 28742.6 |
| protein of unknown function | SAMN05421512_106258 | Not Available | Positive | 2643993 - 2644490 | 17163.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
