Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphate synthase | SAMN05421512_106219 | Not Available | Negative | 2595875 - 2596477 | 20676.4 |
| apag protein | SAMN05421512_106220 | Not Available | Positive | 2596715 - 2597107 | 14564.2 |
| uncharacterized membrane protein | SAMN05421512_106221 | Not Available | Positive | 2597288 - 2597719 | 15575.6 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_106222 | Not Available | Positive | 2597968 - 2600052 | 76560.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_106223 | Not Available | Positive | 2600198 - 2602342 | 77944.5 |
| tellurite resistance protein | SAMN05421512_106224 | Not Available | Negative | 2602365 - 2602778 | 14878.9 |
| lysyl-trna synthetase, class i | SAMN05421512_106225 | Not Available | Positive | 2603029 - 2604693 | 61466.4 |
| hypothetical protein | SAMN05421512_106226 | Not Available | Negative | 2604780 - 2604874 | 3336.96 |
| methyl-accepting chemotaxis protein | SAMN05421512_106227 | Not Available | Negative | 2605210 - 2606495 | 45759.3 |
| methyl-accepting chemotaxis protein | SAMN05421512_106228 | Not Available | Negative | 2607008 - 2608717 | 60415.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
