Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_106198 | Not Available | Negative | 2569708 - 2570361 | 22661.2 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05421512_106199 | Not Available | Positive | 2570469 - 2571323 | 31756.1 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05421512_106200 | Not Available | Negative | 2571330 - 2572205 | 31832.8 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421512_106201 | Not Available | Positive | 2572504 - 2574384 | 68207.9 |
| dna repair exonuclease sbccd nuclease subunit | SAMN05421512_106202 | Not Available | Positive | 2574329 - 2575672 | 47922.9 |
| aaa domain-containing protein | SAMN05421512_106203 | Not Available | Positive | 2575678 - 2579187 | 125998.0 |
| hypothetical protein | SAMN05421512_106204 | Not Available | Positive | 2579272 - 2580480 | 42973.7 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN05421512_106205 | Not Available | Negative | 2580501 - 2580788 | 9995.07 |
| transcriptional regulator, tetr family | SAMN05421512_106206 | Not Available | Negative | 2580817 - 2581392 | 21061.2 |
| three-cys-motif partner protein | SAMN05421512_106207 | Not Available | Positive | 2582995 - 2583489 | 18455.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
