Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system substrate-binding protein | SAMN05421512_106178 | Not Available | Positive | 2545851 - 2546969 | 40656.7 |
| spermidine/putrescine transport system atp-binding protein | SAMN05421512_106179 | Not Available | Positive | 2547069 - 2548166 | 39299.5 |
| spermidine/putrescine transport system permease protein | SAMN05421512_106180 | Not Available | Positive | 2548159 - 2549520 | 48525.1 |
| spermidine/putrescine transport system permease protein | SAMN05421512_106181 | Not Available | Positive | 2549517 - 2550362 | 30609.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421512_106182 | Not Available | Positive | 2550426 - 2550911 | 18036.5 |
| hypothetical protein | SAMN05421512_106183 | Not Available | Positive | 2550908 - 2551618 | 26136.4 |
| tetratricopeptide repeat-containing protein | SAMN05421512_106184 | Not Available | Negative | 2551622 - 2552236 | 21490.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05421512_106185 | Not Available | Positive | 2552480 - 2553889 | 51167.3 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05421512_106186 | Not Available | Positive | 2553999 - 2555030 | 36201.7 |
| phosphate abc transporter membrane protein 1, phot family | SAMN05421512_106187 | Not Available | Positive | 2555114 - 2556583 | 51063.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
