Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj-class molecular chaperone with c-terminal zn finger domain | SAMN05421512_106168 | Not Available | Negative | 2535840 - 2536841 | 35126.5 |
| outer membrane surface antigen | SAMN05421512_106169 | Not Available | Negative | 2537004 - 2537510 | 17355.4 |
| methyltransferase domain-containing protein | SAMN05421512_106170 | Not Available | Negative | 2537684 - 2538577 | 33498.8 |
| magnesium transporter | SAMN05421512_106171 | Not Available | Negative | 2538747 - 2539721 | 35788.8 |
| hypothetical protein | SAMN05421512_106172 | Not Available | Negative | 2539855 - 2540001 | 4766.95 |
| protein of unknown function | SAMN05421512_106173 | Not Available | Negative | 2540244 - 2541215 | 34893.6 |
| fatty-acyl-coa synthase | SAMN05421512_106174 | Not Available | Negative | 2541307 - 2542950 | 61109.2 |
| phosphoglycolate phosphatase | SAMN05421512_106175 | Not Available | Negative | 2543046 - 2543762 | 24534.1 |
| phosphoglycolate phosphatase | SAMN05421512_106176 | Not Available | Negative | 2543765 - 2544472 | 24993.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_106177 | Not Available | Negative | 2544592 - 2545512 | 32347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
