Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | SAMN05421512_106158 | Not Available | Positive | 2526217 - 2526834 | 22682.2 |
| hypothetical protein | SAMN05421512_106159 | Not Available | Positive | 2526861 - 2526995 | 4910.04 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN05421512_106160 | Not Available | Positive | 2526999 - 2527742 | 26041.5 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN05421512_106161 | Not Available | Positive | 2527814 - 2529073 | 44235.7 |
| methyltransferase domain-containing protein | SAMN05421512_106162 | Not Available | Positive | 2529119 - 2530249 | 42085.2 |
| exodeoxyribonuclease vii small subunit | SAMN05421512_106163 | Not Available | Negative | 2530262 - 2530516 | 9247.97 |
| acetoin utilization deacetylase acuc | SAMN05421512_106164 | Not Available | Negative | 2530623 - 2531552 | 33514.9 |
| translation factor sua5 | SAMN05421512_106165 | Not Available | Negative | 2531985 - 2532977 | 33818.3 |
| acyl-coa dehydrogenase | SAMN05421512_106166 | Not Available | Positive | 2533148 - 2534917 | 62619.6 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421512_106167 | Not Available | Positive | 2534939 - 2535682 | 26453.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
