Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier-protein] reductase | SAMN05421512_106148 | Not Available | Positive | 2514472 - 2515290 | 29375.4 |
| probable phosphoglycerate mutase | SAMN05421512_106149 | Not Available | Positive | 2515388 - 2516014 | 23350.8 |
| protein of unknown function | SAMN05421512_106150 | Not Available | Negative | 2516028 - 2516288 | 9413.57 |
| transcriptional regulator, marr family | SAMN05421512_106151 | Not Available | Positive | 2516649 - 2517107 | 17358.0 |
| protein of unknown function | SAMN05421512_106152 | Not Available | Positive | 2517247 - 2518455 | 43328.1 |
| chorismate synthase | SAMN05421512_106153 | Not Available | Positive | 2518551 - 2519636 | 38871.9 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05421512_106154 | Not Available | Positive | 2519705 - 2521024 | 47679.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05421512_106155 | Not Available | Positive | 2521449 - 2523368 | 68884.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_106156 | Not Available | Positive | 2523639 - 2525069 | 50366.0 |
| hypothetical protein | SAMN05421512_106157 | Not Available | Positive | 2525668 - 2526210 | 18654.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
