Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_106138 | Not Available | Negative | 2506002 - 2506760 | 28281.2 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421512_106139 | Not Available | Positive | 2507103 - 2508365 | 45193.3 |
| hypothetical protein | SAMN05421512_106140 | Not Available | Negative | 2508450 - 2509136 | 24275.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_106141 | Not Available | Positive | 2509341 - 2509967 | 21936.2 |
| hypothetical protein | SAMN05421512_106142 | Not Available | Negative | 2509995 - 2510267 | 9870.42 |
| tigr02301 family protein | SAMN05421512_106143 | Not Available | Negative | 2510411 - 2510800 | 14410.2 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421512_106144 | Not Available | Negative | 2510907 - 2511329 | 14930.8 |
| hypothetical protein | SAMN05421512_106145 | Not Available | Negative | 2511399 - 2511905 | 18086.4 |
| putative sos response-associated peptidase yedk | SAMN05421512_106146 | Not Available | Positive | 2512035 - 2512802 | 27800.9 |
| 4-phosphoerythronate dehydrogenase (fad-dependent) | SAMN05421512_106147 | Not Available | Negative | 2512822 - 2514375 | 55051.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
