Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ceramidase | SAMN05421512_106108 | Not Available | Positive | 2473016 - 2473696 | 24355.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05421512_106109 | Not Available | Positive | 2473758 - 2476061 | 82644.0 |
| menaquinone-dependent protoporphyrinogen oxidase | SAMN05421512_106110 | Not Available | Positive | 2476174 - 2476731 | 20451.3 |
| electron-transferring-flavoprotein dehydrogenase | SAMN05421512_106111 | Not Available | Negative | 2476780 - 2478459 | 60655.1 |
| dna polymerase | SAMN05421512_106112 | Not Available | Positive | 2478701 - 2479633 | 32698.3 |
| signal peptide peptidase sppa | SAMN05421512_106113 | Not Available | Positive | 2479721 - 2480572 | 30832.3 |
| hypothetical protein | SAMN05421512_106114 | Not Available | Positive | 2480589 - 2480774 | 6752.29 |
| hypothetical protein | SAMN05421512_106115 | Not Available | Negative | 2480844 - 2481248 | 13316.8 |
| glycyl-trna synthetase alpha chain | SAMN05421512_106116 | Not Available | Positive | 2481518 - 2482492 | 36558.9 |
| hypothetical protein | SAMN05421512_106117 | Not Available | Positive | 2482539 - 2483018 | 17654.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
