Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cmp-n-acetylneuraminic acid synthetase | SAMN05421512_10185 | Not Available | Negative | 83968 - 84678 | 26786.8 |
| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase | SAMN05421512_10186 | Not Available | Negative | 84675 - 85424 | 27670.7 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN05421512_10187 | Not Available | Negative | 85421 - 86590 | 42438.1 |
| n-acetylneuraminate synthase | SAMN05421512_10188 | Not Available | Negative | 86616 - 87485 | 31739.3 |
| flagellin flgl | SAMN05421512_10189 | Not Available | Positive | 87849 - 89234 | 47115.9 |
| flagellin flgl | SAMN05421512_10190 | Not Available | Positive | 89458 - 90846 | 47670.8 |
| flagellin flgl | SAMN05421512_10191 | Not Available | Positive | 91043 - 92431 | 47659.0 |
| flagellar protein flbt | SAMN05421512_10192 | Not Available | Positive | 92540 - 93013 | 17496.8 |
| flagellar protein flaf | SAMN05421512_10193 | Not Available | Positive | 92964 - 93287 | 11814.2 |
| flagellin n-terminal helical region | SAMN05421512_10194 | Not Available | Negative | 93509 - 95038 | 54585.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
