Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subcomplex a subunit | SAMN05421512_10698 | Not Available | Positive | 2465360 - 2466118 | 27382.5 |
| atp synthase f0 subcomplex c subunit | SAMN05421512_10699 | Not Available | Positive | 2466197 - 2466424 | 7554.38 |
| f-type h+-transporting atpase subunit b | SAMN05421512_106100 | Not Available | Positive | 2466539 - 2467105 | 20231.8 |
| f-type h+-transporting atpase subunit b | SAMN05421512_106101 | Not Available | Positive | 2467116 - 2467595 | 17387.8 |
| hypothetical protein | SAMN05421512_106102 | Not Available | Positive | 2467990 - 2468784 | 28319.2 |
| rnase hii | SAMN05421512_106103 | Not Available | Negative | 2468606 - 2469268 | 23319.2 |
| dna repair photolyase | SAMN05421512_106104 | Not Available | Negative | 2469345 - 2470484 | 42065.7 |
| ef-hand domain pair | SAMN05421512_106105 | Not Available | Negative | 2470664 - 2470897 | 7919.06 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_106106 | Not Available | Negative | 2471239 - 2472207 | 34312.7 |
| molybdenum cofactor biosynthesis protein b | SAMN05421512_106107 | Not Available | Negative | 2472342 - 2472899 | 20500.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
