Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421512_10677 | Not Available | Positive | 2442628 - 2443080 | 16968.1 |
| transcriptional regulator, arsr family | SAMN05421512_10678 | Not Available | Positive | 2443061 - 2443393 | 11682.8 |
| rnase hi | SAMN05421512_10679 | Not Available | Negative | 2443427 - 2443885 | 17007.0 |
| homoserine kinase | SAMN05421512_10680 | Not Available | Negative | 2443882 - 2444847 | 35313.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421512_10681 | Not Available | Negative | 2444887 - 2445870 | 35444.3 |
| hypothetical protein | SAMN05421512_10682 | Not Available | Positive | 2447185 - 2447784 | 21066.2 |
| aminomethyltransferase | SAMN05421512_10684 | Not Available | Positive | 2448191 - 2449339 | 40286.4 |
| glycine cleavage system h protein | SAMN05421512_10685 | Not Available | Positive | 2449407 - 2449778 | 13253.3 |
| organic hydroperoxide reductase osmc/ohra | SAMN05421512_10686 | Not Available | Positive | 2449782 - 2450279 | 17764.9 |
| glycine dehydrogenase (decarboxylating) alpha subunit | SAMN05421512_10687 | Not Available | Positive | 2450281 - 2451624 | 47698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
