Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer | SAMN05421512_10637 | Not Available | Positive | 2399280 - 2401226 | 67864.0 |
| dna mismatch repair protein mutl | SAMN05421512_10638 | Not Available | Positive | 2401384 - 2403258 | 67052.4 |
| hypothetical protein | SAMN05421512_10639 | Not Available | Positive | 2403368 - 2403661 | 10770.7 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN05421512_10640 | Not Available | Negative | 2403666 - 2404220 | 19777.7 |
| 23s rrna pseudouridine2605 synthase | SAMN05421512_10641 | Not Available | Negative | 2404217 - 2406274 | 73895.6 |
| trna(arg) a34 adenosine deaminase tada | SAMN05421512_10642 | Not Available | Positive | 2406413 - 2406886 | 16676.8 |
| heme-degrading monooxygenase hmoa | SAMN05421512_10643 | Not Available | Positive | 2406946 - 2407290 | 12911.3 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421512_10644 | Not Available | Negative | 2407319 - 2408173 | 30962.4 |
| nte family protein | SAMN05421512_10645 | Not Available | Negative | 2408260 - 2409111 | 30207.0 |
| mosc domain-containing protein yiim | SAMN05421512_10646 | Not Available | Negative | 2409141 - 2409641 | 17523.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
