Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_10627 | Not Available | Negative | 2390145 - 2390864 | 26583.5 |
| signal peptidase ii | SAMN05421512_10628 | Not Available | Negative | 2391051 - 2391566 | 18620.8 |
| eama domain-containing membrane protein rard | SAMN05421512_10629 | Not Available | Negative | 2391584 - 2392537 | 33598.2 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05421512_10630 | Not Available | Negative | 2392534 - 2393535 | 35572.2 |
| 3-hydroxybutyryl-coa dehydratase | SAMN05421512_10631 | Not Available | Negative | 2393706 - 2394161 | 16328.5 |
| two-component system, chemotaxis family, response regulator chey | SAMN05421512_10632 | Not Available | Positive | 2394403 - 2394786 | 14259.5 |
| chemotaxis protein chez | SAMN05421512_10633 | Not Available | Positive | 2394926 - 2395600 | 24836.2 |
| putative peptidoglycan binding domain-containing protein | SAMN05421512_10634 | Not Available | Negative | 2395794 - 2396882 | 37025.4 |
| hypothetical protein | SAMN05421512_10635 | Not Available | Negative | 2396866 - 2397960 | 40617.2 |
| had-superfamily class iia hydrolase, tigr01459 | SAMN05421512_10636 | Not Available | Negative | 2398115 - 2398987 | 31058.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
