Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein tadg | SAMN05421512_10617 | Not Available | Positive | 2377828 - 2379456 | 60056.8 |
| hypothetical protein | SAMN05421512_10618 | Not Available | Negative | 2379494 - 2380120 | 21645.5 |
| two-component system, repressor protein luxo | SAMN05421512_10619 | Not Available | Negative | 2380198 - 2381697 | 53843.1 |
| rnd family efflux transporter, mfp subunit | SAMN05421512_10620 | Not Available | Positive | 2381968 - 2382987 | 36880.4 |
| lipoprotein-releasing system permease protein | SAMN05421512_10621 | Not Available | Positive | 2382992 - 2384230 | 43712.7 |
| lipoprotein-releasing system atp-binding protein | SAMN05421512_10622 | Not Available | Positive | 2384227 - 2384958 | 26459.2 |
| copper chaperone | SAMN05421512_10623 | Not Available | Negative | 2384966 - 2385163 | 6699.0 |
| cyclic-di-gmp phosphodiesterase, flagellum assembly factor tipf | SAMN05421512_10624 | Not Available | Positive | 2385417 - 2386940 | 56841.2 |
| zinc protease | SAMN05421512_10625 | Not Available | Negative | 2387040 - 2388416 | 49237.9 |
| zinc protease | SAMN05421512_10626 | Not Available | Negative | 2388413 - 2389930 | 54235.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
