Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421512_1067 | Not Available | Negative | 2366247 - 2366936 | 24893.2 |
| hypothetical protein | SAMN05421512_1068 | Not Available | Negative | 2367256 - 2368044 | 29840.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05421512_1069 | Not Available | Negative | 2368129 - 2369676 | 55342.4 |
| dolichol-phosphate mannosyltransferase | SAMN05421512_10610 | Not Available | Negative | 2369718 - 2370869 | 40640.7 |
| histidyl-trna synthetase | SAMN05421512_10611 | Not Available | Positive | 2371124 - 2372749 | 59542.8 |
| atp phosphoribosyltransferase regulatory subunit | SAMN05421512_10612 | Not Available | Positive | 2372746 - 2373873 | 39608.1 |
| atp phosphoribosyltransferase | SAMN05421512_10613 | Not Available | Positive | 2373885 - 2374883 | 35045.7 |
| slyx protein | SAMN05421512_10614 | Not Available | Negative | 2374906 - 2375118 | 7969.34 |
| chaperonin groel | SAMN05421512_10615 | Not Available | Negative | 2375512 - 2377149 | 57542.4 |
| chaperonin groes | SAMN05421512_10616 | Not Available | Negative | 2377254 - 2377541 | 10199.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
