Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrylyl-coa reductase (nadph) | SAMN05421512_105365 | Not Available | Negative | 2345820 - 2346812 | 34078.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_105366 | Not Available | Positive | 2347066 - 2348301 | 43313.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_105367 | Not Available | Positive | 2348540 - 2349838 | 46791.6 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_105368 | Not Available | Positive | 2349945 - 2351606 | 58108.3 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_105369 | Not Available | Positive | 2351644 - 2352828 | 41949.2 |
| urea transport system atp-binding protein | SAMN05421512_105370 | Not Available | Positive | 2352833 - 2353579 | 27095.4 |
| hypothetical protein | SAMN05421512_105371 | Not Available | Positive | 2353667 - 2354185 | 19435.8 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_105372 | Not Available | Positive | 2354211 - 2354906 | 25415.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421512_105373 | Not Available | Negative | 2354919 - 2355689 | 26605.1 |
| uncharacterized membrane protein | SAMN05421512_105374 | Not Available | Negative | 2355807 - 2356205 | 14386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
