Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted permease yjgp/yjgq family protein | SAMN05421512_105355 | Not Available | Negative | 2334521 - 2335744 | 42811.5 |
| phosphatidylglycerophosphatase a | SAMN05421512_105356 | Not Available | Positive | 2335867 - 2336346 | 16443.4 |
| phosphatidate cytidylyltransferase | SAMN05421512_105357 | Not Available | Negative | 2336354 - 2337142 | 26485.3 |
| 3-dehydrosphinganine reductase | SAMN05421512_105358 | Not Available | Negative | 2337154 - 2337993 | 28910.0 |
| myo-inositol-1-phosphate synthase | SAMN05421512_105359 | Not Available | Negative | 2337996 - 2339108 | 39471.4 |
| protein of unknown function | SAMN05421512_105360 | Not Available | Negative | 2339198 - 2339875 | 24618.6 |
| serine palmitoyltransferase | SAMN05421512_105361 | Not Available | Negative | 2339936 - 2341177 | 45213.2 |
| 2-aminoethylphosphonate--pyruvate transaminase | SAMN05421512_105362 | Not Available | Negative | 2341784 - 2342902 | 39488.7 |
| phosphonopyruvate decarboxylase | SAMN05421512_105363 | Not Available | Negative | 2342899 - 2344041 | 39151.1 |
| phosphoenolpyruvate mutase | SAMN05421512_105364 | Not Available | Negative | 2344066 - 2345685 | 58352.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
