Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | SAMN05421512_105345 | Not Available | Negative | 2323344 - 2325443 | 74215.9 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN05421512_105346 | Not Available | Negative | 2325573 - 2326400 | 29281.7 |
| peptidylprolyl isomerase/fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05421512_105347 | Not Available | Positive | 2326610 - 2327035 | 15088.3 |
| archaetidylinositol phosphate synthase | SAMN05421512_105348 | Not Available | Negative | 2327111 - 2327740 | 22489.8 |
| xylulokinase | SAMN05421512_105349 | Not Available | Negative | 2327769 - 2329364 | 56086.0 |
| stealth protein cr3, conserved region 3 | SAMN05421512_105350 | Not Available | Positive | 2329492 - 2330481 | 37221.2 |
| phosphatidylinositol alpha-mannosyltransferase | SAMN05421512_105351 | Not Available | Negative | 2330486 - 2331604 | 39945.4 |
| cdp-alcohol phosphatidyltransferase | SAMN05421512_105352 | Not Available | Negative | 2331601 - 2332374 | 27159.2 |
| choline kinase | SAMN05421512_105353 | Not Available | Positive | 2332457 - 2333212 | 27149.6 |
| lipopolysaccharide export lptbfgc system, permease protein lptf | SAMN05421512_105354 | Not Available | Negative | 2333294 - 2334517 | 43954.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
