Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| scyllo-inositol 2-dehydrogenase (nadp+) | SAMN05421512_105325 | Not Available | Negative | 2301445 - 2302491 | 37753.3 |
| uncharacterized protein, contains caspase domain | SAMN05421512_105326 | Not Available | Positive | 2302697 - 2304859 | 77526.2 |
| adenylate/guanylate cyclase | SAMN05421512_105327 | Not Available | Positive | 2304909 - 2306873 | 69892.5 |
| hypothetical protein | SAMN05421512_105328 | Not Available | Positive | 2306951 - 2307691 | 25579.2 |
| sugar phosphate permease | SAMN05421512_105329 | Not Available | Negative | 2307708 - 2308946 | 43068.6 |
| inner membrane protein | SAMN05421512_105330 | Not Available | Negative | 2309076 - 2310164 | 39952.5 |
| predicted dehydrogenase | SAMN05421512_105331 | Not Available | Negative | 2310325 - 2311497 | 41691.8 |
| sugar phosphate isomerase/epimerase | SAMN05421512_105332 | Not Available | Negative | 2311537 - 2312592 | 38719.3 |
| dihydroxyacetone kinase dhak subunit | SAMN05421512_105333 | Not Available | Negative | 2312672 - 2313661 | 34244.4 |
| hypothetical protein | SAMN05421512_105334 | Not Available | Negative | 2313680 - 2314126 | 16491.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
