Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421512_105315 | Not Available | Negative | 2290856 - 2292142 | 44385.9 |
| protein of unknown function | SAMN05421512_105316 | Not Available | Negative | 2292207 - 2292884 | 23920.6 |
| trap transporter, dctm subunit | SAMN05421512_105317 | Not Available | Negative | 2292927 - 2294207 | 44671.7 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_105318 | Not Available | Negative | 2294204 - 2294752 | 19568.0 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_105319 | Not Available | Negative | 2294780 - 2295823 | 36774.5 |
| uncharacterized protein ycsi, upf0317 family | SAMN05421512_105320 | Not Available | Negative | 2295846 - 2296706 | 30229.4 |
| transcriptional regulator, lysr family | SAMN05421512_105321 | Not Available | Negative | 2296782 - 2297702 | 33393.4 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_105322 | Not Available | Positive | 2297890 - 2298519 | 21637.0 |
| molecular chaperone htpg | SAMN05421512_105323 | Not Available | Negative | 2298574 - 2300508 | 70572.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421512_105324 | Not Available | Negative | 2300621 - 2301448 | 29594.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
