Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf2249 family | SAMN05421512_105295 | Not Available | Negative | 2265525 - 2265830 | 11497.5 |
| thiamine biosynthesis lipoprotein | SAMN05421512_105296 | Not Available | Negative | 2266041 - 2267036 | 35926.9 |
| copper chaperone nosl | SAMN05421512_105297 | Not Available | Negative | 2267046 - 2267573 | 18750.1 |
| cu-processing system permease protein | SAMN05421512_105298 | Not Available | Negative | 2267570 - 2268397 | 28371.6 |
| cu-processing system atp-binding protein | SAMN05421512_105299 | Not Available | Negative | 2268394 - 2269311 | 33107.1 |
| nitrous oxidase accessory protein | SAMN05421512_105300 | Not Available | Negative | 2269311 - 2270681 | 48990.3 |
| nitrous oxide reductase apoprotein | SAMN05421512_105301 | Not Available | Negative | 2270681 - 2272597 | 70660.1 |
| nosr/niri family transcriptional regulator, nitrous oxide reductase regulator | SAMN05421512_105302 | Not Available | Negative | 2272616 - 2274931 | 85564.4 |
| rubrerythrin | SAMN05421512_105303 | Not Available | Positive | 2275126 - 2275983 | 32319.2 |
| transposase | SAMN05421512_105304 | Not Available | Positive | 2276099 - 2276752 | 24650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
