Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase cbb3-type subunit 4 | SAMN05421512_105285 | Not Available | Negative | 2253242 - 2253415 | 6784.11 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05421512_105286 | Not Available | Negative | 2253428 - 2254180 | 27788.8 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05421512_105287 | Not Available | Negative | 2254184 - 2255821 | 60840.3 |
| cbs domain-containing membrane protein | SAMN05421512_105288 | Not Available | Positive | 2256454 - 2257590 | 39389.1 |
| iron complex outermembrane recepter protein | SAMN05421512_105289 | Not Available | Negative | 2257829 - 2260108 | 81013.7 |
| hypothetical protein | SAMN05421512_105290 | Not Available | Positive | 2260817 - 2261314 | 17592.1 |
| nitt/taut family transport system substrate-binding protein | SAMN05421512_105291 | Not Available | Positive | 2261318 - 2262313 | 34023.4 |
| nitt/taut family transport system permease protein | SAMN05421512_105292 | Not Available | Positive | 2262356 - 2263192 | 29387.5 |
| nitt/taut family transport system atp-binding protein | SAMN05421512_105293 | Not Available | Positive | 2263189 - 2263938 | 27140.8 |
| uncharacterized protein involved in response to no | SAMN05421512_105294 | Not Available | Positive | 2263935 - 2265227 | 45134.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
