Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tcta family transporter | SAMN05421512_105265 | Not Available | Positive | 2230722 - 2232215 | 52338.5 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_105266 | Not Available | Negative | 2232261 - 2232734 | 17899.6 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_105267 | Not Available | Positive | 2232849 - 2233937 | 38542.5 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_105268 | Not Available | Positive | 2233961 - 2234467 | 17976.4 |
| trap transporter, dctm subunit | SAMN05421512_105269 | Not Available | Positive | 2234464 - 2235759 | 45201.4 |
| alpha/beta hydrolase family protein | SAMN05421512_105270 | Not Available | Positive | 2235759 - 2236730 | 35043.9 |
| predicted dehydrogenase | SAMN05421512_105271 | Not Available | Negative | 2237057 - 2238121 | 37973.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_105272 | Not Available | Negative | 2238133 - 2238879 | 26555.7 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05421512_105273 | Not Available | Negative | 2239067 - 2240017 | 34632.6 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_105274 | Not Available | Negative | 2240014 - 2241078 | 38440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
