Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase | SAMN05421512_105255 | Not Available | Negative | 2221557 - 2222993 | 50489.5 |
| putative tricarboxylic transport membrane protein | SAMN05421512_105256 | Not Available | Negative | 2223030 - 2224508 | 50445.8 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05421512_105257 | Not Available | Negative | 2224510 - 2224971 | 15890.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421512_105258 | Not Available | Negative | 2224962 - 2225894 | 32082.3 |
| dna-binding transcriptional regulator, gntr family | SAMN05421512_105259 | Not Available | Positive | 2226079 - 2226741 | 24927.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421512_105260 | Not Available | Positive | 2227092 - 2228066 | 33401.8 |
| amino acid synthesis | SAMN05421512_105261 | Not Available | Positive | 2228088 - 2228678 | 21214.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_105262 | Not Available | Positive | 2228696 - 2229565 | 31645.1 |
| transcriptional regulator, gntr family | SAMN05421512_105263 | Not Available | Positive | 2229567 - 2230253 | 24971.2 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05421512_105264 | Not Available | Positive | 2230277 - 2230717 | 15161.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
