Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homodimeric dihydroxyacetone kinase | SAMN05421512_105245 | Not Available | Negative | 2210331 - 2212028 | 57245.8 |
| benzylsuccinate coa-transferase bbsf subunit | SAMN05421512_105246 | Not Available | Negative | 2212056 - 2213210 | 40583.6 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_105247 | Not Available | Negative | 2213294 - 2214280 | 34277.7 |
| hypothetical protein | SAMN05421512_105248 | Not Available | Negative | 2214312 - 2215271 | 34100.2 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421512_105249 | Not Available | Negative | 2215289 - 2217151 | 65580.1 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN05421512_105250 | Not Available | Negative | 2217196 - 2217978 | 27817.1 |
| hypothetical protein | SAMN05421512_105251 | Not Available | Negative | 2217975 - 2218385 | 15315.1 |
| acetyl-coa acetyltransferase | SAMN05421512_105252 | Not Available | Negative | 2218390 - 2219508 | 40995.8 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05421512_105253 | Not Available | Positive | 2219684 - 2220598 | 34788.5 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421512_105254 | Not Available | Negative | 2220628 - 2221518 | 31127.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
