Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase delta subunit | SAMN05421512_105235 | Not Available | Negative | 2196214 - 2196438 | 8229.91 |
| fdhd protein | SAMN05421512_105236 | Not Available | Negative | 2196428 - 2197243 | 27942.6 |
| formate dehydrogenase alpha subunit | SAMN05421512_105237 | Not Available | Negative | 2197248 - 2200118 | 105108.0 |
| formate dehydrogenase beta subunit | SAMN05421512_105238 | Not Available | Negative | 2200123 - 2201679 | 55153.4 |
| formate dehydrogenase gamma subunit | SAMN05421512_105239 | Not Available | Negative | 2201676 - 2202155 | 17299.7 |
| major facilitator superfamily protein | SAMN05421512_105240 | Not Available | Negative | 2202409 - 2204154 | 61781.0 |
| hamp domain-containing protein | SAMN05421512_105241 | Not Available | Negative | 2204497 - 2206545 | 74935.5 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421512_105242 | Not Available | Negative | 2206538 - 2207944 | 51636.5 |
| nadp-dependent alcohol dehydrogenase | SAMN05421512_105243 | Not Available | Negative | 2208115 - 2209266 | 41192.5 |
| predicted oxidoreductase | SAMN05421512_105244 | Not Available | Negative | 2209310 - 2210293 | 35213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
