Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_105205 | Not Available | Negative | 2166334 - 2166870 | 17387.7 |
| cytochrome c, mono- and diheme variants | SAMN05421512_105206 | Not Available | Negative | 2166879 - 2168120 | 45272.2 |
| gluconate 2-dehydrogenase alpha chain | SAMN05421512_105207 | Not Available | Negative | 2168117 - 2169877 | 64504.8 |
| gluconate 2-dehydrogenase gamma chain | SAMN05421512_105208 | Not Available | Negative | 2169901 - 2170635 | 27033.6 |
| sporulation protein ylmc, prc-barrel domain family | SAMN05421512_105209 | Not Available | Negative | 2170833 - 2171843 | 36093.7 |
| ferritin-like metal-binding protein ycie | SAMN05421512_105210 | Not Available | Positive | 2172058 - 2172555 | 18539.9 |
| hypothetical protein | SAMN05421512_105211 | Not Available | Positive | 2172781 - 2173776 | 35347.8 |
| hypothetical protein | SAMN05421512_105212 | Not Available | Negative | 2173838 - 2174152 | 11290.3 |
| dihydroorotase | SAMN05421512_105213 | Not Available | Negative | 2174198 - 2175247 | 38185.9 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN05421512_105214 | Not Available | Negative | 2175244 - 2176527 | 46215.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
