Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_105195 | Not Available | Negative | 2158403 - 2158705 | 11117.5 |
| metallothionein | SAMN05421512_105196 | Not Available | Positive | 2158894 - 2159130 | 8321.79 |
| trehalose 6-phosphate synthase | SAMN05421512_105197 | Not Available | Positive | 2159243 - 2160769 | 56268.9 |
| dna end-binding protein ku | SAMN05421512_105198 | Not Available | Positive | 2160801 - 2161646 | 31213.2 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN05421512_105199 | Not Available | Positive | 2161650 - 2164109 | 90197.1 |
| dna end-binding protein ku | SAMN05421512_105200 | Not Available | Negative | 2164106 - 2164954 | 31916.4 |
| hypothetical protein | SAMN05421512_105201 | Not Available | Positive | 2165104 - 2165295 | 7163.49 |
| hypothetical protein | SAMN05421512_105202 | Not Available | Positive | 2165320 - 2165529 | 7069.77 |
| protein of unknown function | SAMN05421512_105203 | Not Available | Positive | 2165555 - 2166085 | 19560.1 |
| hypothetical protein | SAMN05421512_105204 | Not Available | Positive | 2166096 - 2166317 | 8198.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
