Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 2 | SAMN05421512_105185 | Not Available | Negative | 2152871 - 2153596 | 25858.7 |
| uncharacterized membrane protein | SAMN05421512_105186 | Not Available | Positive | 2153612 - 2154112 | 17572.4 |
| uncharacterized membrane protein | SAMN05421512_105187 | Not Available | Negative | 2154093 - 2154593 | 17753.5 |
| putative membrane protein | SAMN05421512_105188 | Not Available | Negative | 2154593 - 2155348 | 26327.9 |
| hypothetical protein | SAMN05421512_105189 | Not Available | Negative | 2155447 - 2155680 | 8479.76 |
| hypothetical protein | SAMN05421512_105190 | Not Available | Negative | 2155793 - 2156002 | 7208.08 |
| predicted purr-regulated permease perm | SAMN05421512_105191 | Not Available | Negative | 2156054 - 2157097 | 36586.2 |
| protein of unknwon function | SAMN05421512_105192 | Not Available | Positive | 2157356 - 2157544 | 6606.76 |
| hyperosmotically inducible protein | SAMN05421512_105193 | Not Available | Positive | 2157555 - 2157833 | 9706.5 |
| hypothetical protein | SAMN05421512_105194 | Not Available | Negative | 2157888 - 2158190 | 10955.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
