Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN05421512_105165 | Not Available | Negative | 2136011 - 2137741 | 62825.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_105166 | Not Available | Positive | 2137953 - 2138924 | 34763.3 |
| cbs domain-containing protein | SAMN05421512_105167 | Not Available | Negative | 2138995 - 2139429 | 15316.4 |
| bon domain-containing protein | SAMN05421512_105168 | Not Available | Positive | 2139683 - 2140303 | 24385.8 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421512_105169 | Not Available | Negative | 2140402 - 2141115 | 25789.3 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | SAMN05421512_105170 | Not Available | Negative | 2141126 - 2142610 | 55453.1 |
| hypothetical protein | SAMN05421512_105171 | Not Available | Negative | 2142758 - 2142979 | 7807.01 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421512_105172 | Not Available | Negative | 2143093 - 2143668 | 21377.5 |
| hypothetical protein | SAMN05421512_105173 | Not Available | Positive | 2144127 - 2144453 | 10973.5 |
| hypothetical protein | SAMN05421512_105174 | Not Available | Positive | 2144461 - 2144724 | 9662.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
