Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type fe3+ transport system, substrate-binding protein | SAMN05421512_105155 | Not Available | Negative | 2122842 - 2124185 | 47867.8 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05421512_105156 | Not Available | Negative | 2124387 - 2125742 | 48775.9 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05421512_105157 | Not Available | Negative | 2125729 - 2127846 | 75404.3 |
| phosphoglycerate transport regulatory protein pgtc | SAMN05421512_105158 | Not Available | Negative | 2127855 - 2129258 | 50083.2 |
| transcriptional regulator, deor family | SAMN05421512_105159 | Not Available | Positive | 2129540 - 2130319 | 28125.5 |
| iron(iii) transport system substrate-binding protein | SAMN05421512_105160 | Not Available | Positive | 2130456 - 2131463 | 36660.6 |
| iron(iii) transport system atp-binding protein | SAMN05421512_105161 | Not Available | Positive | 2131635 - 2132693 | 37626.5 |
| iron(iii) transport system permease protein | SAMN05421512_105162 | Not Available | Positive | 2132690 - 2134378 | 60067.7 |
| hypothetical protein | SAMN05421512_105163 | Not Available | Positive | 2134625 - 2134816 | 7451.12 |
| dna topoisomerase-1 | SAMN05421512_105164 | Not Available | Negative | 2134915 - 2135916 | 37293.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
