Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN05421512_105145 | Not Available | Negative | 2110421 - 2112601 | 78197.5 |
| transcriptional regulator, arac family | SAMN05421512_105146 | Not Available | Positive | 2112767 - 2113771 | 36506.7 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421512_105147 | Not Available | Negative | 2113912 - 2114721 | 28884.8 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05421512_105148 | Not Available | Negative | 2114749 - 2115777 | 36787.4 |
| putative spermidine/putrescine transport system permease protein | SAMN05421512_105149 | Not Available | Negative | 2115774 - 2116565 | 28621.2 |
| putative spermidine/putrescine transport system permease protein | SAMN05421512_105150 | Not Available | Negative | 2116570 - 2117373 | 27953.3 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05421512_105151 | Not Available | Negative | 2117496 - 2118491 | 35998.8 |
| transcriptional regulator, laci family | SAMN05421512_105152 | Not Available | Negative | 2118523 - 2119587 | 37309.5 |
| iron(iii) transport system atp-binding protein | SAMN05421512_105153 | Not Available | Negative | 2119891 - 2121000 | 40099.2 |
| iron(iii) transport system permease protein | SAMN05421512_105154 | Not Available | Negative | 2121016 - 2122746 | 61710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
