Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase specialized sigma subunit, sigma24 family | SAMN05421512_105135 | Not Available | Positive | 2101099 - 2101893 | 28975.8 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05421512_105136 | Not Available | Negative | 2101974 - 2102171 | 7647.83 |
| sensor domain chase1-containing protein | SAMN05421512_105137 | Not Available | Positive | 2102343 - 2103947 | 58597.9 |
| predicted purr-regulated permease perm | SAMN05421512_105138 | Not Available | Positive | 2104149 - 2105279 | 39949.7 |
| iron complex transport system atp-binding protein | SAMN05421512_105139 | Not Available | Negative | 2105246 - 2106025 | 27645.6 |
| iron complex transport system permease protein | SAMN05421512_105140 | Not Available | Negative | 2106022 - 2107047 | 36587.6 |
| iron complex transport system permease protein | SAMN05421512_105141 | Not Available | Negative | 2107037 - 2108038 | 34529.6 |
| iron complex transport system substrate-binding protein | SAMN05421512_105142 | Not Available | Negative | 2108082 - 2109008 | 32195.6 |
| hypothetical protein | SAMN05421512_105143 | Not Available | Negative | 2109056 - 2110036 | 34479.3 |
| hypothetical protein | SAMN05421512_105144 | Not Available | Negative | 2110043 - 2110330 | 11122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
