Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05421512_105115 | Not Available | Negative | 2083717 - 2084634 | 33273.4 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_105116 | Not Available | Negative | 2084812 - 2086326 | 56178.1 |
| transcriptional regulator, iclr family | SAMN05421512_105117 | Not Available | Positive | 2086504 - 2087280 | 28119.1 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05421512_105118 | Not Available | Negative | 2087296 - 2088561 | 43040.1 |
| ribulose-bisphosphate carboxylase large chain | SAMN05421512_105119 | Not Available | Negative | 2088566 - 2089864 | 45778.7 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05421512_105120 | Not Available | Negative | 2089873 - 2090412 | 20256.9 |
| trap transporter, dctm subunit | SAMN05421512_105121 | Not Available | Negative | 2090421 - 2091698 | 44116.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_105122 | Not Available | Negative | 2091695 - 2092219 | 18610.6 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05421512_105123 | Not Available | Negative | 2092250 - 2093266 | 36175.1 |
| transcriptional regulator, laci family | SAMN05421512_105124 | Not Available | Positive | 2093458 - 2094471 | 36320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
