Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05421512_105105 | Not Available | Negative | 2072929 - 2073708 | 27623.1 |
| transcriptional regulator, gntr family | SAMN05421512_105106 | Not Available | Positive | 2073795 - 2074526 | 26883.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421512_105107 | Not Available | Positive | 2074556 - 2075512 | 32950.6 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05421512_105108 | Not Available | Positive | 2075514 - 2075960 | 15480.5 |
| putative tricarboxylic transport membrane protein | SAMN05421512_105109 | Not Available | Positive | 2075962 - 2077470 | 51817.3 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05421512_105110 | Not Available | Negative | 2077739 - 2079154 | 51620.2 |
| gamma-glutamyltransferase 1 threonine peptidase. merops family t03 | SAMN05421512_105111 | Not Available | Negative | 2079156 - 2080739 | 55041.5 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_105112 | Not Available | Negative | 2080800 - 2081822 | 36319.2 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_105113 | Not Available | Negative | 2081819 - 2082805 | 35788.1 |
| peptide/nickel transport system permease protein | SAMN05421512_105114 | Not Available | Negative | 2082811 - 2083710 | 32142.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
