Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_10595 | Not Available | Positive | 2061154 - 2062122 | 33704.0 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421512_10596 | Not Available | Positive | 2062147 - 2064012 | 63794.6 |
| protein of unknown function | SAMN05421512_10597 | Not Available | Positive | 2064009 - 2065346 | 46245.4 |
| hypothetical protein | SAMN05421512_10598 | Not Available | Positive | 2065349 - 2065660 | 11170.7 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421512_10599 | Not Available | Negative | 2065668 - 2067554 | 69070.9 |
| predicted dehydrogenase | SAMN05421512_105100 | Not Available | Negative | 2067551 - 2068675 | 39161.9 |
| putative tricarboxylic transport membrane protein | SAMN05421512_105101 | Not Available | Negative | 2068735 - 2070261 | 53558.9 |
| putative tricarboxylic transport membrane protein | SAMN05421512_105102 | Not Available | Negative | 2070263 - 2070745 | 17251.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421512_105103 | Not Available | Negative | 2070812 - 2071804 | 33813.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_105104 | Not Available | Negative | 2071942 - 2072868 | 33752.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
