Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_10585 | Not Available | Positive | 2051483 - 2052436 | 33690.4 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_10586 | Not Available | Positive | 2052433 - 2053182 | 27355.6 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_10587 | Not Available | Positive | 2053182 - 2053859 | 24195.6 |
| aldehyde dehydrogenase (nad+) | SAMN05421512_10588 | Not Available | Positive | 2053859 - 2055313 | 51375.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421512_10589 | Not Available | Positive | 2055327 - 2056076 | 26340.8 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05421512_10590 | Not Available | Negative | 2056207 - 2057046 | 28116.8 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_10591 | Not Available | Positive | 2057289 - 2058422 | 41112.4 |
| pimeloyl-coa biosynthesis protein bioc | SAMN05421512_10592 | Not Available | Positive | 2058409 - 2059125 | 25776.7 |
| methyltransferase domain-containing protein | SAMN05421512_10593 | Not Available | Positive | 2059248 - 2060054 | 28632.7 |
| lysr family transcriptional regulator, carnitine catabolism transcriptional activator | SAMN05421512_10594 | Not Available | Negative | 2060058 - 2060990 | 33325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
