Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydrolase | SAMN05421512_10525 | Not Available | Negative | 1985463 - 1986647 | 44356.7 |
| transcriptional regulator, asnc family | SAMN05421512_10526 | Not Available | Positive | 1986826 - 1987311 | 18229.1 |
| aspartate-semialdehyde dehydrogenase | SAMN05421512_10527 | Not Available | Positive | 1987454 - 1988941 | 53564.0 |
| l-2,4-diaminobutyrate transaminase | SAMN05421512_10528 | Not Available | Positive | 1988973 - 1990343 | 49537.1 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_10529 | Not Available | Negative | 1990427 - 1990921 | 17751.4 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421512_10530 | Not Available | Positive | 1991137 - 1992912 | 65643.5 |
| gnat-family acetyltransferase tigr03103 | SAMN05421512_10531 | Not Available | Positive | 1992923 - 1994797 | 68444.1 |
| hydrolase, peptidase m42 family | SAMN05421512_10532 | Not Available | Positive | 1994794 - 1995960 | 42376.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421512_10533 | Not Available | Negative | 1995970 - 1996923 | 35393.0 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05421512_10534 | Not Available | Negative | 1996929 - 1999139 | 77430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
