Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate transport system atp-binding protein | SAMN05421512_10515 | Not Available | Negative | 1976954 - 1977805 | 30416.9 |
| hypothetical protein | SAMN05421512_10516 | Not Available | Negative | 1977928 - 1978548 | 23539.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnl | SAMN05421512_10517 | Not Available | Negative | 1978559 - 1979290 | 26032.6 |
| putative phosphonate transport system atp-binding protein | SAMN05421512_10518 | Not Available | Negative | 1979293 - 1980078 | 28869.9 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase | SAMN05421512_10519 | Not Available | Negative | 1980075 - 1981004 | 34412.1 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | SAMN05421512_10520 | Not Available | Negative | 1981001 - 1982119 | 40989.8 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh | SAMN05421512_10521 | Not Available | Negative | 1982119 - 1982745 | 21725.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phng | SAMN05421512_10522 | Not Available | Negative | 1982745 - 1983212 | 16023.3 |
| transcriptional regulator, gntr family | SAMN05421512_10523 | Not Available | Positive | 1983513 - 1984259 | 26236.9 |
| acetylornithine deacetylase | SAMN05421512_10524 | Not Available | Negative | 1984280 - 1985443 | 41259.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
