Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains fist_n domain | SAMN05421512_1055 | Not Available | Positive | 1966756 - 1967961 | 43124.3 |
| signal transduction histidine kinase | SAMN05421512_1056 | Not Available | Positive | 1967958 - 1969310 | 49572.7 |
| two component transcriptional regulator, luxr family | SAMN05421512_1057 | Not Available | Negative | 1969334 - 1970119 | 27743.3 |
| methyltransferase, fkbm family | SAMN05421512_1058 | Not Available | Negative | 1970213 - 1970947 | 26505.7 |
| ribose 1,5-bisphosphokinase | SAMN05421512_1059 | Not Available | Negative | 1971112 - 1971693 | 20046.1 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN05421512_10510 | Not Available | Negative | 1971697 - 1972836 | 41344.1 |
| putative phosphonate metabolism protein | SAMN05421512_10511 | Not Available | Negative | 1972867 - 1973559 | 24968.8 |
| phosphonate transport system permease protein | SAMN05421512_10512 | Not Available | Negative | 1973685 - 1975031 | 49045.4 |
| phosphonate transport system permease protein | SAMN05421512_10513 | Not Available | Negative | 1975033 - 1975890 | 30693.9 |
| phosphonate transport system substrate-binding protein | SAMN05421512_10514 | Not Available | Negative | 1975973 - 1976878 | 31964.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
