Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_104385 | Not Available | Positive | 1956415 - 1956597 | 6297.42 |
| aspartyl protease family protein | SAMN05421512_104386 | Not Available | Positive | 1956597 - 1957313 | 25141.8 |
| uncharacterized membrane protein yfca | SAMN05421512_104387 | Not Available | Negative | 1957320 - 1958150 | 28755.1 |
| pp_01757 | SAMN05421512_104388 | Not Available | Negative | 1958217 - 1959236 | Not Available |
| microcystin-dependent protein | SAMN05421512_104389 | Not Available | Positive | 1959580 - 1960410 | 27581.9 |
| hypothetical protein | SAMN05421512_104390 | Not Available | Positive | 1960654 - 1961411 | 25657.4 |
| carbon-monoxide dehydrogenase medium subunit | SAMN05421512_1051 | Not Available | Negative | 1961616 - 1962416 | 27376.4 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05421512_1052 | Not Available | Negative | 1962538 - 1964907 | 84046.9 |
| carbon-monoxide dehydrogenase small subunit | SAMN05421512_1053 | Not Available | Negative | 1965161 - 1965652 | 16862.4 |
| hypothetical protein | SAMN05421512_1054 | Not Available | Negative | 1965779 - 1966531 | 25486.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
