Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf302 | SAMN05421512_104375 | Not Available | Negative | 1946178 - 1946681 | 17655.8 |
| transcriptional regulator, asnc family | SAMN05421512_104376 | Not Available | Negative | 1946707 - 1947204 | 19077.0 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN05421512_104377 | Not Available | Positive | 1947430 - 1948404 | 34855.1 |
| uracil-dna glycosylase | SAMN05421512_104378 | Not Available | Negative | 1948510 - 1949145 | 23392.3 |
| two-component system, cell cycle sensor histidine kinase plec | SAMN05421512_104379 | Not Available | Positive | 1949305 - 1950873 | 57512.2 |
| predicted dienelactone hydrolase | SAMN05421512_104380 | Not Available | Negative | 1950909 - 1951955 | 36489.6 |
| transcriptional regulator, arac family | SAMN05421512_104381 | Not Available | Positive | 1952104 - 1953132 | 36122.5 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN05421512_104382 | Not Available | Negative | 1953145 - 1954167 | 34933.1 |
| cobalamin-5'-phosphate synthase | SAMN05421512_104383 | Not Available | Positive | 1954275 - 1955102 | 28080.1 |
| esterase/lipase superfamily enzyme | SAMN05421512_104384 | Not Available | Positive | 1955185 - 1956363 | 41662.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
