Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp) | SAMN05421512_10138 | Not Available | Positive | 33341 - 34555 | 45368.2 |
| hypothetical protein | SAMN05421512_10139 | Not Available | Positive | 34722 - 35162 | 15787.2 |
| cupin-like domain-containing protein | SAMN05421512_10140 | Not Available | Positive | 35288 - 36157 | 31946.7 |
| acetyltransferase involved in cellulose biosynthesis, celd/bcsl family | SAMN05421512_10141 | Not Available | Positive | 36162 - 37370 | 45000.8 |
| voltage-gated potassium channel | SAMN05421512_10142 | Not Available | Negative | 37392 - 38897 | 54230.8 |
| alanyl-trna synthetase | SAMN05421512_10143 | Not Available | Negative | 38902 - 41583 | 96433.6 |
| recombination protein reca | SAMN05421512_10144 | Not Available | Negative | 41965 - 43044 | 38579.5 |
| probable phosphoglycerate mutase | SAMN05421512_10145 | Not Available | Negative | 43297 - 43851 | 20334.4 |
| pseudouridine kinase | SAMN05421512_10146 | Not Available | Positive | 44079 - 45020 | 31893.2 |
| pseudouridine-5'-phosphate glycosidase | SAMN05421512_10147 | Not Available | Positive | 45151 - 46125 | 33439.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
