Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | SAMN05421512_104365 | Not Available | Positive | 1936771 - 1937325 | 19667.2 |
| molybdopterin molybdochelatase | SAMN05421512_104366 | Not Available | Positive | 1937300 - 1938589 | 45481.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05421512_104367 | Not Available | Positive | 1938784 - 1939563 | 27897.3 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05421512_104368 | Not Available | Positive | 1939628 - 1940341 | 25398.6 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05421512_104369 | Not Available | Positive | 1940338 - 1941174 | 31335.4 |
| cystathionine gamma-synthase | SAMN05421512_104370 | Not Available | Positive | 1941273 - 1942436 | 40626.7 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05421512_104371 | Not Available | Negative | 1942433 - 1943308 | 32025.4 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421512_104372 | Not Available | Positive | 1943725 - 1944603 | 30737.7 |
| helix-turn-helix domain-containing protein | SAMN05421512_104373 | Not Available | Positive | 1944729 - 1945673 | 34536.1 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421512_104374 | Not Available | Positive | 1945746 - 1946165 | 14981.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
