Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase gamma subunit | SAMN05421512_104355 | Not Available | Negative | 1925976 - 1927136 | 42393.8 |
| formate dehydrogenase beta subunit | SAMN05421512_104356 | Not Available | Negative | 1927494 - 1928093 | 21514.6 |
| formate dehydrogenase alpha subunit | SAMN05421512_104357 | Not Available | Negative | 1928106 - 1931087 | 110167.0 |
| formate dehydrogenase region tat target | SAMN05421512_104358 | Not Available | Negative | 1931207 - 1931398 | 6794.93 |
| chaperone tord involved in molybdoenzyme tora maturation | SAMN05421512_104359 | Not Available | Negative | 1931479 - 1932150 | 24161.6 |
| atp-binding protein involved in chromosome partitioning | SAMN05421512_104360 | Not Available | Negative | 1932603 - 1933784 | 41371.4 |
| sensors of blue-light using fad | SAMN05421512_104361 | Not Available | Positive | 1934056 - 1934511 | 16717.3 |
| sensors of blue-light using fad | SAMN05421512_104362 | Not Available | Positive | 1934644 - 1935102 | 16738.9 |
| fdhd protein | SAMN05421512_104363 | Not Available | Positive | 1935231 - 1936151 | 34409.1 |
| molybdenum cofactor guanylyltransferase | SAMN05421512_104364 | Not Available | Positive | 1936148 - 1936774 | 21728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
