Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421512_104335 | Not Available | Positive | 1909165 - 1909755 | 21596.9 |
| hypothetical protein | SAMN05421512_104336 | Not Available | Positive | 1909890 - 1910351 | 16504.8 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421512_104337 | Not Available | Negative | 1910354 - 1911067 | 26065.1 |
| duf971 family protein | SAMN05421512_104338 | Not Available | Negative | 1911141 - 1911512 | 14254.8 |
| cyclic pyranopterin monophosphate synthase subunit moaa | SAMN05421512_104339 | Not Available | Positive | 1911738 - 1912739 | 37408.2 |
| hypothetical protein | SAMN05421512_104340 | Not Available | Positive | 1912741 - 1913079 | 11539.8 |
| protein of unknown function | SAMN05421512_104341 | Not Available | Negative | 1913100 - 1913852 | 27590.3 |
| protein of unknown function | SAMN05421512_104342 | Not Available | Negative | 1913849 - 1914478 | 23616.2 |
| 4fe-4s dicluster domain-containing protein | SAMN05421512_104343 | Not Available | Positive | 1914635 - 1916674 | 71649.7 |
| protein of unknown function | SAMN05421512_104344 | Not Available | Negative | 1916724 - 1917026 | 11076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
