Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | SAMN05421512_104325 | Not Available | Negative | 1893654 - 1894532 | 31098.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_104326 | Not Available | Positive | 1894741 - 1895625 | 32481.6 |
| penicillin-binding protein 1c | SAMN05421512_104327 | Not Available | Negative | 1895642 - 1897717 | 73956.6 |
| hypothetical protein | SAMN05421512_104328 | Not Available | Negative | 1897771 - 1903323 | 198856.0 |
| gst-like protein | SAMN05421512_104329 | Not Available | Positive | 1903543 - 1904238 | 25774.9 |
| gst-like protein | SAMN05421512_104330 | Not Available | Negative | 1904266 - 1904898 | 23849.6 |
| polyisoprenoid-binding protein ycei | SAMN05421512_104331 | Not Available | Positive | 1905167 - 1905742 | 20503.0 |
| cytochrome b561 | SAMN05421512_104332 | Not Available | Positive | 1905813 - 1906400 | 21398.7 |
| polyisoprenoid-binding protein ycei | SAMN05421512_104333 | Not Available | Positive | 1906496 - 1907062 | 19753.3 |
| fumarase, class i, homodimeric | SAMN05421512_104334 | Not Available | Positive | 1907206 - 1908840 | 59963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
